Stem-loop cli-mir-1a-1

Accession

MI0029893

Description

Columba livia cli-mir-1a-1 precursor miRNA

Sequence

cugcuugagagACAUACUUCUUUAUAUGCCCAUAugaaccugggaagcuaUGGAAUGUAAAGAAGUAUGUAUuucaggugg
((((((((((.((((((((((((((((..(((((..............))))).)))))))))))))))).))))))))))

Structure

          g                GC     ugaacc 
cugcuugaga ACAUACUUCUUUAUAU  CCAUA      u
|||||||||| ||||||||||||||||  |||||       
gguggacuuU UGUAUGAAGAAAUGUA  GGUau      g
          A                -A     cgaagg 

Annotation confidence Not enough data

Genome context

KB375315.1: 3131813-3131893 [-]

Mature cli-miR-1a-5p

• Accession: MIMAT0038391
• Description: Columba livia cli-miR-1a-5p mature miRNA
• Sequence: 12 - ACAUACUUCUUUAUAUGCCCAUA - 34
• Evidence: experimental ; Illumina [1]

Mature cli-miR-1a-3p

• Accession: MIMAT0038392
• Description: Columba livia cli-miR-1a-3p mature miRNA
• Sequence: 51 - UGGAAUGUAAAGAAGUAUGUAU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196