miRBase entry: cli-mir-7a-3

Stem-loop cli-mir-7a-3


Accession
MI0029898
Description
Columba livia cli-mir-7a-3 precursor miRNA


Sequence

gguggucuggcucugcgUGGAAGACUAGUGAUUUUGUUGUUcugauuuauaaaggugaCAACAAAUCAUAGCCUGCCACCcagcccagaccugc
...(((((((..(((.((((.((.(((.((((((.((((((((..........)).))))))))))))))).)).)))).))).)))))))...

Structure
ggu       cu   c    A  A   G      U      -  gauu 
   ggucugg  cug gUGG AG CUA UGAUUU GUUGUU cu    u
   |||||||  ||| |||| || ||| |||||| |||||| ||     
   ccagacc  gac CACC UC GAU ACUAAA CAACag gg    a
cgu       -c   C    G  C   -      -      u  aaau 


Annotation confidence Not enough data
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Genome context
KB375415.1: 436058-436151 [+]

Database links

Mature cli-miR-7a-5p

Accession MIMAT0038396
Description Columba livia cli-miR-7a-5p mature miRNA
Sequence 18 - UGGAAGACUAGUGAUUUUGUUGUU - 41
Evidence experimental
Illumina [1]

Mature cli-miR-7a-3-3p

Accession MIMAT0038399
Description Columba livia cli-miR-7a-3-3p mature miRNA
Sequence 59 - CAACAAAUCAUAGCCUGCCACC - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196