miRBase entry: cli-mir-31

Stem-loop cli-mir-31


Accession
MI0029935
Description
Columba livia cli-mir-31 precursor miRNA


Sequence

ugugcagagcuggaggggAGGCAAGAUGUUGGCAUAGCUGUagaccuaaaaaccUGCUAUGCCAACAUAUUGUCAUCuuuccucucuguuug
...((((((..(((((((.(((((.(((((((((((((.................))))))))))))).))))).))))))).))))))...

Structure
ugu      cu       A     G             UGUagac 
   gcagag  ggagggg GGCAA AUGUUGGCAUAGC       c
   ||||||  ||||||| ||||| |||||||||||||       u
   ugucuc  ccuuuCU CUGUU UACAACCGUAUCG       a
guu      -u       A     A             Uccaaaa 


Annotation confidence Not enough data
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Genome context
KB375742.1: 622302-622393 [+]

Database links

Mature cli-miR-31-5p

Accession MIMAT0038460
Description Columba livia cli-miR-31-5p mature miRNA
Sequence 19 - AGGCAAGAUGUUGGCAUAGCUGU - 41
Evidence experimental
Illumina [1]

Mature cli-miR-31-3p

Accession MIMAT0038461
Description Columba livia cli-miR-31-3p mature miRNA
Sequence 55 - UGCUAUGCCAACAUAUUGUCAUC - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196