Stem-loop sequence cli-mir-106

AccessionMI0029951 (change log)
DescriptionColumba livia miR-106 stem-loop
Stem-loop
   uugaguu    -aa         c g     g    guu 
5'        gugc   aagugcuua a ugcag uaga   u
          ||||   ||||||||| | ||||| ||||    
3'        uacg   uucacgaau u acguc aucu   a
   -------    guc         a g     -    agg 
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (CLiv1.0; GCA_000337935.1) Overlapping transcripts
KB375349.1: 3452467-3452537 [-]
intergenic
Clustered miRNAs
< 10kb from cli-mir-106
cli-mir-106KB375349.1: 3452467-3452537 [-]
cli-mir-18bKB375349.1: 3452301-3452383 [-]
cli-mir-20bKB375349.1: 3452099-3452195 [-]
cli-mir-19b-2KB375349.1: 3451977-3452067 [-]
cli-mir-92-2KB375349.1: 3451812-3451895 [-]
cli-mir-363KB375349.1: 3451668-3451762 [-]
Database links

Mature sequence cli-miR-106-5p

Accession MIMAT0038487
Sequence

12 - 

aaaagugcuuacagugcagguag

 - 34

Get sequence
Evidence experimental; Illumina [1]

Mature sequence cli-miR-106-3p

Accession MIMAT0038488
Sequence

47 - 

acugcaguauaagcacuucugg

 - 68

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:24798503 "Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles" Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ Evol Dev. 16:189-196(2014).