miRBase entry: cli-mir-107

Stem-loop cli-mir-107


Accession
MI0029952
Description
Columba livia cli-mir-107 precursor miRNA


Sequence

guguucucuuugcuuucAGCUUCUUUACAGUGUUGCCUUGuggcauggaguucaAGCAGCAUUGUACAGGGCUAUcaaagcaugg
.......((.((((((.((((.((.(((((((((((.(((.(((.....))))))))))))))))).))))))...)))))).))

Structure
guguucu  u      --c    U  U           C   u   a 
       cu ugcuuu   AGCU CU UACAGUGUUGC UUG ggc u
       || ||||||   |||| || ||||||||||| ||| ||| g
       gg acgaaa   UCGG GA AUGUUACGACG Aac uug g
-------  u      cUA    -  C           -   -   a 


Annotation confidence Not enough data
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Genome context
KB375396.1: 365360-365444 [-]

Database links

Mature cli-miR-107-5p

Accession MIMAT0038489
Description Columba livia cli-miR-107-5p mature miRNA
Sequence 18 - AGCUUCUUUACAGUGUUGCCUUG - 40
Evidence experimental
Illumina [1]

Mature cli-miR-107-3p

Accession MIMAT0038490
Description Columba livia cli-miR-107-3p mature miRNA
Sequence 55 - AGCAGCAUUGUACAGGGCUAU - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196