miRBase entry: cli-mir-125-1

Stem-loop cli-mir-125-1


Accession
MI0029956
Description
Columba livia cli-mir-125-1 precursor miRNA


Sequence

guugcgccccucucaaUCCCUGAGACCCUAACUUGUGAuguuuagcuuuuaaauccACGGGUUAGGCUCUUGGGAGCUgugaguugugcuuu
...((((..(((.((.((((.((((.(((((((((((..(((((.....))))).))))))))))).))))))))..)).)))..))))...

Structure
guu    cc   u  -a    U    C           Au     g 
   gcgc  cuc ca  UCCC GAGA CCUAACUUGUG  guuua c
   ||||  ||| ||  |||| |||| |||||||||||  ||||| u
   cgug  gag gU  AGGG UUCU GGAUUGGGCAc  uaaau u
uuu    uu   u  CG    -    C           -c     u 


Annotation confidence Not enough data
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Genome context
KB375651.1: 846253-846344 [-]

Database links

Mature cli-miR-125-5p

Accession MIMAT0038496
Description Columba livia cli-miR-125-5p mature miRNA
Sequence 17 - UCCCUGAGACCCUAACUUGUGA - 38
Evidence experimental
Illumina [1]

Mature cli-miR-125-3p

Accession MIMAT0038497
Description Columba livia cli-miR-125-3p mature miRNA
Sequence 57 - ACGGGUUAGGCUCUUGGGAGCU - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196