miRBase entry: cli-mir-145

Stem-loop cli-mir-145


Accession
MI0029979
Description
Columba livia cli-mir-145 precursor miRNA


Sequence

ccgugcccucaggGUCCAGUUUUCCCAGGAAUCCCUuaggcgcuacguuggGGAUUCCUGGAAAUACUGUUCUUgaggccacgg
(((((.((((((((..((((.((.((((((((((((..((((...)))))))))))))))).)).)))).)))))))).)))))

Structure
     c        UC    U  C            ua    c 
ccgug ccucaggG  CAGU UU CCAGGAAUCCCU  ggcg  
||||| ||||||||  |||| || ||||||||||||  |||| u
ggcac ggagUUCU  GUCA AA GGUCCUUAGGgg  uugc  
     c        -U    U  A            --    a 


Annotation confidence Not enough data
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Genome context
KB375668.1: 918669-918752 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cli-mir-145
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cli-miR-145-5p

Accession MIMAT0038533
Description Columba livia cli-miR-145-5p mature miRNA
Sequence 14 - GUCCAGUUUUCCCAGGAAUCCCU - 36
Evidence experimental
Illumina [1]

Mature cli-miR-145-3p

Accession MIMAT0038534
Description Columba livia cli-miR-145-3p mature miRNA
Sequence 52 - GGAUUCCUGGAAAUACUGUUCUU - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196