Stem-loop cli-mir-153a

Accession

MI0029986

Description

Columba livia cli-mir-153a precursor miRNA

Sequence

ucucgcagcugccggcgUCAUUUUUGUGAUUUGCAGCUaguaaucuggcuccagUUGCAUAGUCACAAAAGUGAUCguuggcagccgugccu
...(((.((((((((((((((((((((((((((((((((((......)))..))))))).)))))))))))))).)))))))))).)))...

Structure

ucu   a          -              -       --   aa 
   cgc gcugccggcg UCAUUUUUGUGAUU UGCAGCU  agu  u
   ||| |||||||||| |||||||||||||| |||||||  |||   
   gug cgacgguugC AGUGAAAACACUGA ACGUUga  ucg  c
ucc   c          U              U       cc   gu 

Annotation confidence Not enough data

Genome context

KB375305.1: 1622007-1622098 [-]

Mature cli-miR-153a-5p

• Accession: MIMAT0038545
• Description: Columba livia cli-miR-153a-5p mature miRNA
• Sequence: 18 - UCAUUUUUGUGAUUUGCAGCU - 38
• Evidence: experimental ; Illumina [1]

Mature cli-miR-153a-3p

• Accession: MIMAT0038546
• Description: Columba livia cli-miR-153a-3p mature miRNA
• Sequence: 55 - UUGCAUAGUCACAAAAGUGAUC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196