miRBase entry: cli-mir-206

Stem-loop cli-mir-206

Accession

MI0030013

Description

Columba livia cli-mir-206 precursor miRNA

Sequence

uucucuuaugagauuACAUGCUUCUUUAUAUCCCCAUAgggauuaggcugcuaUGGAAUGUAAGGAAGUGUGUGGuuucagggaga
.(((((..(((((((((((((((((((((((..((((((.(.......).)))))).))))))))))))))))))))))).)))))

Structure

u     ua                       CC      g au 
 ucucu  ugagauuACAUGCUUCUUUAUAU  CCAUAg g  u
 |||||  |||||||||||||||||||||||  |||||| |  a
 agagg  acuuuGGUGUGUGAAGGAAUGUA  GGUauc u  g
-     -g                       -A      g cg

Annotation confidence Not enough data

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Genome context

KB375390.1: 1979-2064 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cli-mir-206

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cli-miR-206-5p

Accession	MIMAT0038588
Description	Columba livia cli-miR-206-5p mature miRNA
Sequence	16 - ACAUGCUUCUUUAUAUCCCCAUA - 38
Evidence	experimental Illumina [1]

Mature cli-miR-206-3p

Accession	MIMAT0038589
Description	Columba livia cli-miR-206-3p mature miRNA
Sequence	54 - UGGAAUGUAAGGAAGUGUGUGG - 75
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196