miRBase entry: cli-mir-214

Stem-loop cli-mir-214


Accession
MI0030015
Description
Columba livia cli-mir-214 precursor miRNA


Sequence

ggaguugucaugugucUGCCUGUCUACACUUGCUGUGCagaacauccucucaccuguACAGCAGGCACAGACAGGCAGUcgcaugacaacccagc
((.(((((((((((.((((((((((...((((((((((((.............))))))))))))...)))))))))).)))))))))))))...

Structure
---  a           u          ACA            aacau 
   gg guugucaugug cUGCCUGUCU   CUUGCUGUGCag     c
   || ||||||||||| ||||||||||   ||||||||||||     c
   cc caacaguacgc GACGGACAGA   GGACGACAuguc     u
cga  -           U          CAC            cacuc 


Annotation confidence Not enough data
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Genome context
KB375307.1: 10456129-10456223 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cli-mir-214
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cli-miR-214-5p

Accession MIMAT0038592
Description Columba livia cli-miR-214-5p mature miRNA
Sequence 17 - UGCCUGUCUACACUUGCUGUGC - 38
Evidence experimental
Illumina [1]

Mature cli-miR-214-3p

Accession MIMAT0038593
Description Columba livia cli-miR-214-3p mature miRNA
Sequence 58 - ACAGCAGGCACAGACAGGCAGU - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196