miRBase entry: cli-mir-302b-1

Stem-loop cli-mir-302b-1

Accession

MI0030029

Description

Columba livia cli-mir-302b-1 precursor miRNA

Sequence

cuuuuacuuuaacauggaggugcuuucugugacuuaaaagaaguAAGUGCUUCCAUGUUUUAGuagagg
((((((((..(((((((((((((((.((.............)).)))))))))))))))..))))))))

Structure

        uu               u  gugac 
cuuuuacu  aacauggaggugcuu cu     u
||||||||  ||||||||||||||| ||     u
ggagauGA  UUGUACCUUCGUGAA ga     a
        UU               u  agaaa

Annotation confidence Not enough data

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Genome context

KB376606.1: 1626021-1626089 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from cli-mir-302b-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cli-miR-302b-3p

Accession	MIMAT0038616
Description	Columba livia cli-miR-302b-3p mature miRNA
Sequence	45 - AAGUGCUUCCAUGUUUUAG - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196