miRBase entry: cli-mir-338a

Stem-loop cli-mir-338a


Accession
MI0030032
Description
Columba livia cli-mir-338a precursor miRNA


Sequence

aauguuuacuucuagcAACACUAUCCUGAUGCUGUCAGAGUaagugguaaagcUCCAGCAUCAGUGAUUUUGUUGUuagugguaaauuca
...(((((((.(((((((((..((((((((((((...((((..........))))))))))))).)))..))))))))).)))))))...

Structure
aau       u         CU   -         UCA    aagu 
   guuuacu cuagcAACA  AUC CUGAUGCUG   GAGU    g
   ||||||| |||||||||  ||| |||||||||   ||||     
   uaaaugg gauUGUUGU  UAG GACUACGAC   CUcg    g
acu       u         UU   U         ---    aaau 


Annotation confidence Not enough data
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Genome context
KB376357.1: 334950-335039 [+]

Database links

Mature cli-miR-338a-5p

Accession MIMAT0038618
Description Columba livia cli-miR-338a-5p mature miRNA
Sequence 17 - AACACUAUCCUGAUGCUGUCAGAGU - 41
Evidence experimental
Illumina [1]

Mature cli-miR-338a-3p

Accession MIMAT0038619
Description Columba livia cli-miR-338a-3p mature miRNA
Sequence 54 - UCCAGCAUCAGUGAUUUUGUUGU - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196