Stem-loop sequence cli-mir-449a

AccessionMI0030042 (change log)
DescriptionColumba livia miR-449a stem-loop
Stem-loop
   auc         u          -               ugaaa 
5'    uguguggga gggauggcag uguguguuagcuggu     u
      ||||||||| |||||||||| |||||||||||||||      
3'    auacaccuu uccuaucguu acguacaaucgacua     u
   ucc         u          g               caguc 
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (CLiv1.0; GCA_000337935.1) Overlapping transcripts
KB375359.1: 2803138-2803226 [-]
intergenic
Clustered miRNAs
< 10kb from cli-mir-449a
cli-mir-449cKB375359.1: 2804268-2804358 [-]
cli-mir-449bKB375359.1: 2803297-2803383 [-]
cli-mir-449aKB375359.1: 2803138-2803226 [-]
cli-mir-449dKB375359.1: 2802140-2802228 [-]
Database links

Mature sequence cli-miR-449a-5p

Accession MIMAT0038636
Sequence

18 - 

uggcaguguguguuagcuggu

 - 38

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:24798503 "Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles" Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ Evol Dev. 16:189-196(2014).