Stem-loop cli-mir-551a

Accession

MI0030057

Description

Columba livia cli-mir-551a precursor miRNA

Sequence

cugugcgugaccuugGAAAUCAAGUGUAGGUGGAGCCUguggcagcgaucaagGCGACCCACACUUGGUUUCAAggguccgcaggg
((.((((.((((((.((((((((((((.((.(..((((.(((......)))))))..))))))))))))))).)))))))))).))

Structure

  g    u      g            A  U GA    g   ca 
cu ugcg gaccuu GAAAUCAAGUGU GG G  GCCU ugg  g
|| |||| |||||| |||||||||||| || |  |||| |||   
gg acgc cugggA CUUUGGUUCACA CC C  CGga acu  c
  g    -      A            -  - AG    -   ag 

Annotation confidence Not enough data

Genome context

KB376210.1: 3837047-3837132 [-]

Mature cli-miR-551a-5p

• Accession: MIMAT0038662
• Description: Columba livia cli-miR-551a-5p mature miRNA
• Sequence: 16 - GAAAUCAAGUGUAGGUGGAGCCU - 38
• Evidence: experimental ; Illumina [1]

Mature cli-miR-551a-3p

• Accession: MIMAT0038663
• Description: Columba livia cli-miR-551a-3p mature miRNA
• Sequence: 54 - GCGACCCACACUUGGUUUCAA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196