Stem-loop cli-mir-1388

Accession

MI0030064

Description

Columba livia cli-mir-1388 precursor miRNA

Sequence

agcgagaggcaccucgAGGACUGUCUAACCUGAGAAUGgugaaauguaagggucaAUCUCAGGUUCGUCAGCCCAUGagacgccuucuccag
...(((((((..((((.((.(((.(.(((((((((.(((.............))).))))))))).).))).)).))))..))).))))...

Structure

agc    -   ac    A  A   U U         A   ugaaa 
   gaga ggc  cucg GG CUG C AACCUGAGA UGg     u
   |||| |||  |||| || ||| | ||||||||| |||     g
   cucu ccg  gaGU CC GAC G UUGGACUCU acu     u
gac    u   ca    A  C   U C         A   gggaa 

Annotation confidence Not enough data

Genome context

KB375315.1: 1588254-1588345 [-]

Mature cli-miR-1388-5p

• Accession: MIMAT0038674
• Description: Columba livia cli-miR-1388-5p mature miRNA
• Sequence: 17 - AGGACUGUCUAACCUGAGAAUG - 38
• Evidence: experimental ; Illumina [1]

Mature cli-miR-1388-3p

• Accession: MIMAT0038675
• Description: Columba livia cli-miR-1388-3p mature miRNA
• Sequence: 56 - AUCUCAGGUUCGUCAGCCCAUG - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196