miRBase entry: cli-mir-3618

Stem-loop cli-mir-3618


Accession
MI0030091
Description
Columba livia cli-mir-3618 precursor miRNA


Sequence

gaaugcauugUGAUUUCCAAUAAUUGAGACAGugauucugaaagcuguCUACAUUAAUGAAAAGAACAAUguaguca
((.((((((((..(((.((.((((..(((((((..........)))))))..)))).)).)))..)))))))).)).

Structure
-  a        GA   C  A    UG       gauu 
 ga ugcauugU  UUU CA UAAU  AGACAGu    c
 || ||||||||  ||| || ||||  |||||||     
 cu augUAACA  AAA GU AUUA  UCugucg    u
a  g        AG   A  A    CA       aaag 


Annotation confidence Not enough data
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Genome context
KB375297.1: 625171-625247 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cli-mir-3618
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cli-miR-3618-5p

Accession MIMAT0038717
Description Columba livia cli-miR-3618-5p mature miRNA
Sequence 11 - UGAUUUCCAAUAAUUGAGACAG - 32
Evidence experimental
Illumina [1]

Mature cli-miR-3618-3p

Accession MIMAT0038718
Description Columba livia cli-miR-3618-3p mature miRNA
Sequence 49 - CUACAUUAAUGAAAAGAACAAU - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196