miRBase entry: cli-mir-9616

Stem-loop cli-mir-9616


Accession
MI0030093
Description
Columba livia cli-mir-9616 precursor miRNA


Sequence

agugggggcUGCGGCCUGGGGCAGCGCAAACCccacuuuaggguggaaaacacaaggUUGAGCUGAUCCAGGCCUGGCcuccccuc
((.((((((((.(((((((..((((...(((((((((....))))).........))))..))))..))))))))))))))).)).

Structure
-  u        C       GG    GCA    ---------     u 
 ag gggggcUG GGCCUGG  CAGC   AACC         ccacu u
 || |||||||| |||||||  ||||   ||||         |||||  
 uc ccucCGGU CCGGACC  GUCG   UUgg         ggugg a
c  c        -       UA    -AG    aacacaaaa     g 


Annotation confidence Not enough data
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Genome context
KB375305.1: 1124429-1124514 [-]

Database links

Mature cli-miR-9616-5p

Accession MIMAT0038721
Description Columba livia cli-miR-9616-5p mature miRNA
Sequence 10 - UGCGGCCUGGGGCAGCGCAAACC - 32
Evidence experimental
Illumina [1]

Mature cli-miR-9616-3p

Accession MIMAT0038722
Description Columba livia cli-miR-9616-3p mature miRNA
Sequence 58 - UUGAGCUGAUCCAGGCCUGGC - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196