Stem-loop cli-mir-9616

Accession

MI0030093

Description

Columba livia cli-mir-9616 precursor miRNA

Sequence

agugggggcUGCGGCCUGGGGCAGCGCAAACCccacuuuaggguggaaaacacaaggUUGAGCUGAUCCAGGCCUGGCcuccccuc
((.((((((((.(((((((..((((...(((((((((....))))).........))))..))))..))))))))))))))).)).

Structure

-  u        C       GG    GCA    ---------     u 
 ag gggggcUG GGCCUGG  CAGC   AACC         ccacu u
 || |||||||| |||||||  ||||   ||||         |||||  
 uc ccucCGGU CCGGACC  GUCG   UUgg         ggugg a
c  c        -       UA    -AG    aacacaaaa     g 

Annotation confidence Not enough data

Genome context

KB375305.1: 1124429-1124514 [-]

Mature cli-miR-9616-5p

• Accession: MIMAT0038721
• Description: Columba livia cli-miR-9616-5p mature miRNA
• Sequence: 10 - UGCGGCCUGGGGCAGCGCAAACC - 32
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9616-3p

• Accession: MIMAT0038722
• Description: Columba livia cli-miR-9616-3p mature miRNA
• Sequence: 58 - UUGAGCUGAUCCAGGCCUGGC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196