miRBase entry: cli-mir-1756b

Stem-loop cli-mir-1756b


Accession
MI0030099
Description
Columba livia cli-mir-1756b precursor miRNA


Sequence

ggagggccagauccucAGCUGAUGUAAAUUAGGAGAGCucugucaauguuaaacgcUUUCCUGAUUUACUCCAGCUGAagauuugaccuggg
..(((..((((((.(((((((..(((((((((((((((................)))))))))))))))..))))))).)))))).)))...

Structure
-gg   gc      c       AU               ucuguca 
   agg  cagauc ucAGCUG  GUAAAUUAGGAGAGC       a
   |||  |||||| |||||||  |||||||||||||||        
   ucc  guuuag AGUCGAC  CAUUUAGUCCUUUcg       u
ggg   -a      a       CU               caaauug 


Annotation confidence Not enough data
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Genome context
KB375875.1: 401725-401816 [+]

Database links

Mature cli-miR-1756b-5p

Accession MIMAT0038733
Description Columba livia cli-miR-1756b-5p mature miRNA
Sequence 17 - AGCUGAUGUAAAUUAGGAGAGC - 38
Evidence experimental
Illumina [1]

Mature cli-miR-1756b-3p

Accession MIMAT0038734
Description Columba livia cli-miR-1756b-3p mature miRNA
Sequence 57 - UUUCCUGAUUUACUCCAGCUGA - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196