miRBase entry: cli-mir-9623

Stem-loop cli-mir-9623


Accession
MI0030102
Description
Columba livia cli-mir-9623 precursor miRNA


Sequence

uaccuaggccuuuucuAGUGUGGGAUUUAAAGUUGUGUguaacucgugacagcAUACCUUUAAAUCCUGGUCUGGacaaggu
.......(((((.(((((..((((((((((((.(((((((........))).)))).))))))))))))..))))).)))))

Structure
uaccuag     u     UG            U    -   aac 
       gccuu ucuAG  UGGGAUUUAAAG UGUG Ugu   u
       ||||| |||||  |||||||||||| |||| |||    
       uggaa aGGUC  GUCCUAAAUUUC AUAc aca   c
-------     c     UG            C    g   gug 


Annotation confidence Not enough data
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Genome context
KB375384.1: 1928127-1928208 [-]

Database links

Mature cli-miR-9623-5p

Accession MIMAT0038737
Description Columba livia cli-miR-9623-5p mature miRNA
Sequence 17 - AGUGUGGGAUUUAAAGUUGUGU - 38
Evidence experimental
Illumina [1]

Mature cli-miR-9623-3p

Accession MIMAT0038738
Description Columba livia cli-miR-9623-3p mature miRNA
Sequence 54 - AUACCUUUAAAUCCUGGUCUGG - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196