miRBase entry: cli-mir-9625

Stem-loop cli-mir-9625


Accession
MI0030104
Description
Columba livia cli-mir-9625 precursor miRNA


Sequence

gagagcaucggagCUGUCGGAGCCGAUGUUCUAGCUggaaugaaaaacggCUGACGCUGGCACCGAGAGCCcuguggcuucc
..((((..(((.(((.((((.((((.((((..(((((..........))))))))).)))).)))).))).)))..))))..

Structure
ga    au   a   G    A    A    CU     gaau 
  gagc  cgg gCU UCGG GCCG UGUU  AGCUg    g
  ||||  ||| ||| |||| |||| ||||  |||||     
  uucg  guc CGA AGCC CGGU GCAG  UCggc    a
cc    gu   C   G    A    C    --     aaaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB376210.1: 1982634-1982715 [-]

Database links

Mature cli-miR-9625-5p

Accession MIMAT0038741
Description Columba livia cli-miR-9625-5p mature miRNA
Sequence 14 - CUGUCGGAGCCGAUGUUCUAGCU - 36
Evidence experimental
Illumina [1]

Mature cli-miR-9625-3p

Accession MIMAT0038742
Description Columba livia cli-miR-9625-3p mature miRNA
Sequence 51 - CUGACGCUGGCACCGAGAGCC - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196