Stem-loop cli-mir-9627

Accession

MI0030106

Description

Columba livia cli-mir-9627 precursor miRNA

Sequence

gaagguuuuguagcuCAGGAGCAGUGCCAAGGCUGGGcuggcucugcgccuCAGCGUGGGCACUGCUCCAGACcuaauaaacccug
...(((((..(((.((.(((((((((((.(.(((((((.(......)))).)))).).))))))))))).)).)))..)))))...

Structure

gaa     ug   c  A           A G    -   u gc 
   gguuu  uag uC GGAGCAGUGCC A GCUG GGc g  u
   |||||  ||| || ||||||||||| | |||| ||| |   
   ccaaa  auc AG CCUCGUCACGG U CGAC ccg c  c
guc     ua   C  A           G G    u   - gu 

Annotation confidence Not enough data

Genome context

KB375513.1: 123086-123171 [+]

Mature cli-miR-9627-5p

• Accession: MIMAT0038745
• Description: Columba livia cli-miR-9627-5p mature miRNA
• Sequence: 16 - CAGGAGCAGUGCCAAGGCUGGG - 37
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9627-3p

• Accession: MIMAT0038746
• Description: Columba livia cli-miR-9627-3p mature miRNA
• Sequence: 52 - CAGCGUGGGCACUGCUCCAGAC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196