Stem-loop cli-mir-9628

Accession

MI0030107

Description

Columba livia cli-mir-9628 precursor miRNA

Sequence

uguuccuucacucauggcugCACAGUCUGGCAGGGCUUGCAGaggccacagagaacuaccuGGAGGCUUUGCCAGCCUGGGCcgccugcggugguggcaa
....((.(((((((.(((.((.(((.((((((((((((.(((((..(.....)..))..))).)))))))))))).))).)).))))).))))).))...

Structure

uguu  u     -  u   u  A   U            G   --  gc a 
    cc ucacu ca ggc gC CAG CUGGCAGGGCUU CAG  ag  c c
    || ||||| || ||| || ||| |||||||||||| |||  ||  | a
    gg ggugg gu ccg CG GUC GACCGUUUCGGA Guc  uc  g g
-aac  u     c  -   c  G   C            G   ca  aa a 

Annotation confidence Not enough data

Genome context

KB375380.1: 13057802-13057901 [-]

Mature cli-miR-9628-5p

• Accession: MIMAT0038747
• Description: Columba livia cli-miR-9628-5p mature miRNA
• Sequence: 21 - CACAGUCUGGCAGGGCUUGCAG - 42
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9628-3p

• Accession: MIMAT0038748
• Description: Columba livia cli-miR-9628-3p mature miRNA
• Sequence: 62 - GGAGGCUUUGCCAGCCUGGGC - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196