miRBase entry: cli-mir-9636

Stem-loop cli-mir-9636


Accession
MI0030116
Description
Columba livia cli-mir-9636 precursor miRNA


Sequence

cgcucccCGCAAAACCAGUGGGUACCUUGUAgaagggacugguggagaguggaCAAGUACCCGCUGGUUUGCUUGgggaggu
..(((((((((((.(((((((((((.((((.......(((.......)))..))))))))))))))))))))..))))))..

Structure
cg      --     A           C    Agaaggg   gg 
  cucccC  GCAAA CCAGUGGGUAC UUGU       acu  u
  ||||||  ||||| ||||||||||| ||||       |||  g
  gagggG  CGUUU GGUCGCCCAUG AACa       uga  g
ug      UU     -           -    -----gg   ga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB377187.1: 232473-232554 [+]

Database links

Mature cli-miR-9636-5p

Accession MIMAT0038765
Description Columba livia cli-miR-9636-5p mature miRNA
Sequence 8 - CGCAAAACCAGUGGGUACCUUGUA - 31
Evidence experimental
Illumina [1]

Mature cli-miR-9636-3p

Accession MIMAT0038766
Description Columba livia cli-miR-9636-3p mature miRNA
Sequence 54 - CAAGUACCCGCUGGUUUGCUUG - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196