Stem-loop pbv-mir-7-2

Accession

MI0030147

Description

Python bivittatus pbv-mir-7-2 precursor miRNA

Sequence

ugccggacuccuuaUGGAAGACUAGUGAUUUUGUUGUUucuguagcucaucucaugaCAACAAGUCACAGUCUGCCUUcuggagucuggc
.((((((((((....((.(((((.(((((((.((((((..((.((.....)))).)))))))))))))))))).))....))))))))))

Structure

u          uuaU  A     A       U      uc  u  c 
 gccggacucc    GG AGACU GUGAUUU GUUGUU  ug ag u
 ||||||||||    || ||||| ||||||| ||||||  || || c
 cggucugagg    CC UCUGA CACUGAA CAACag  ac uc a
-          ucUU  G     -       -      -u  -  u 

Annotation confidence Not enough data

Genome context

KE953793.1: 181528-181617 [+]

Mature pbv-miR-7-5p

• Accession: MIMAT0038817
• Description: Python bivittatus pbv-miR-7-5p mature miRNA
• Sequence: 15 - UGGAAGACUAGUGAUUUUGUUGUU - 38
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-7-2-3p

• Accession: MIMAT0038819
• Description: Python bivittatus pbv-miR-7-2-3p mature miRNA
• Sequence: 58 - CAACAAGUCACAGUCUGCCUU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196