miRBase entry: pbv-mir-9-4

Stem-loop pbv-mir-9-4


Accession
MI0030152
Description
Python bivittatus pbv-mir-9-4 precursor miRNA


Sequence

acagggucgguuucucUCUUUGGUUAUCUAGCUGUAUGaguguaucugaugucaUAAAGCUAGAGAACCGAAUGUAcaaaccgccccgc
...(((.((((((.....(((((((.(((((((.(((((............))))).))))))).))))))).....)))))).)))..

Structure
aca   u      cucUC       A       G     gugua 
   ggg cgguuu     UUUGGUU UCUAGCU UAUGa     u
   ||| ||||||     ||||||| ||||||| |||||      
   ccc gccaaa     AAGCCAA AGAUCGA AUacu     c
-cg   c      cAUGU       G       A     guagu 


Annotation confidence Not enough data
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Genome context
KE954471.1: 22795-22883 [+]

Database links

Mature pbv-miR-9-5p

Accession MIMAT0038821
Description Python bivittatus pbv-miR-9-5p mature miRNA
Sequence 17 - UCUUUGGUUAUCUAGCUGUAUG - 38
Evidence experimental
Illumina [1]

Mature pbv-miR-9-4-3p

Accession MIMAT0038823
Description Python bivittatus pbv-miR-9-4-3p mature miRNA
Sequence 55 - UAAAGCUAGAGAACCGAAUGUA - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196