Stem-loop pbv-mir-16a

Accession

MI0030158

Description

Python bivittatus pbv-mir-16a precursor miRNA

Sequence

gccaguugugccuUAGCAGCACAUAAAUAUUGGAGuuauuauuaguaaaguaucuccaguaucaauugugcugcugaaguaaggcuguu
..(((((.(((.(((((((((((...(((((((((.((((........)))).)))))))))....))))))))))).))).)))))..

Structure

gc     g   c           -UAA         u    auu 
  caguu ugc uUAGCAGCACA    AUAUUGGAG uauu   a
  ||||| ||| |||||||||||    ||||||||| ||||    
  gucgg aug agucgucgugu    uaugaccuc auga   g
uu     a   a           uaac         u    aau 

Annotation confidence Not enough data

Genome context

KE955268.1: 105220-105308 [+]

Mature pbv-miR-16a-5p

• Accession: MIMAT0038833
• Description: Python bivittatus pbv-miR-16a-5p mature miRNA
• Sequence: 14 - UAGCAGCACAUAAAUAUUGGAG - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196