miRBase entry: pbv-mir-19b

Stem-loop pbv-mir-19b


Accession
MI0030165
Description
Python bivittatus pbv-mir-19b precursor miRNA


Sequence

cuguucucugguuaguuuugcagguuugcauccagcuguaugauacucugcUGUGCAAAUCCAUGCAAAACUGacuguggcagu
(((((...((((((((((((((((((((((..((((.............)))))))))).)).)))))))))))))).))))).

Structure
-     cuc              -  -      uc    uguau 
 cuguu   ugguuaguuuugca gg uuugca  cagc     g
 |||||   |||||||||||||| || ||||||  ||||     a
 gacgg   gucaGUCAAAACGU CC AAACGU  GUcg     u
u     --u              A  U      --    ucuca 


Annotation confidence Not enough data
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Genome context
KE958468.1: 77568-77651 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from pbv-mir-19b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pbv-miR-19b-3p

Accession MIMAT0038845
Description Python bivittatus pbv-miR-19b-3p mature miRNA
Sequence 52 - UGUGCAAAUCCAUGCAAAACUG - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196