miRBase entry: pbv-mir-24-2

Stem-loop pbv-mir-24-2


Accession
MI0030173
Description
Python bivittatus pbv-mir-24-2 precursor miRNA


Sequence

gccucccgugccuacugagcugauacucaguugcuuuggaaaaacUGGCUCAGUUCAGCAGGAACAGgag
..((((.((.(((.(((((((((...((((((..........)))))).))))))))).))).)).))))

Structure
gc    c  g   a         uac      gcuu 
  cucc gu ccu cugagcuga   ucaguu    u
  |||| || ||| |||||||||   ||||||     
  gagG CA GGA GACUUGACU   GGUcaa    g
--    A  A   C         --C      aaag 


Annotation confidence Not enough data
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Genome context
KE953590.1: 99565-99634 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from pbv-mir-24-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pbv-miR-24-3p

Accession MIMAT0038857
Description Python bivittatus pbv-miR-24-3p mature miRNA
Sequence 46 - UGGCUCAGUUCAGCAGGAACAG - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196