miRBase entry: pbv-mir-26-3

Stem-loop pbv-mir-26-3


Accession
MI0030176
Description
Python bivittatus pbv-mir-26-3 precursor miRNA


Sequence

gcgaaggucucagccuggUUCAAGUAAUCCAGGAUAGGCUguuaccaggcaacacggCCUAUUCUUGAUUACUUGUUUCaggaggcggcuucuugc
(((((((((.(..(((((..(((((((((.((((((((((((...........)))))))))))).)))))))))..)))))..).))))).))))

Structure
    -     u ag     UU         C            uacc 
gcga agguc c  ccugg  CAAGUAAUC AGGAUAGGCUgu    a
|||| ||||| |  |||||  ||||||||| ||||||||||||    g
cguu uucgg g  ggaCU  GUUCAUUAG UCUUAUCCggca    g
    c     c ga     UU         U            caac 


Annotation confidence Not enough data
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Genome context
KE955192.1: 47243-47338 [-]

Database links

Mature pbv-miR-26-5p

Accession MIMAT0038858
Description Python bivittatus pbv-miR-26-5p mature miRNA
Sequence 19 - UUCAAGUAAUCCAGGAUAGGCU - 40
Evidence experimental
Illumina [1]

Mature pbv-miR-26-3-3p

Accession MIMAT0038860
Description Python bivittatus pbv-miR-26-3-3p mature miRNA
Sequence 58 - CCUAUUCUUGAUUACUUGUUUC - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196