miRBase entry: pbv-mir-92a-1

Stem-loop pbv-mir-92a-1


Accession
MI0030196
Description
Python bivittatus pbv-mir-92a-1 precursor miRNA


Sequence

uuucuacacagguugggaucgguugcaaugcuguguugagucuguggUAUUGCACUUGUCCCGGCCUGUugagguugguggggcaag
.((((((((((((((((((.(((.(((((((((.(......)..)))))))))))).))))))))))))........))))))....

Structure
---u      --------            c   u         -u uu 
    uucuac        acagguugggau ggu gcaaugcug  g  g
    ||||||        |||||||||||| ||| |||||||||  |   
    ggggug        UGUCCGGCCCUG UCA CGUUAUggu  c  a
gaac      guuggagu            U   -         gu ug 


Annotation confidence Not enough data
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Genome context
KE958468.1: 77447-77533 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from pbv-mir-92a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pbv-miR-92a-3p

Accession MIMAT0038889
Description Python bivittatus pbv-miR-92a-3p mature miRNA
Sequence 48 - UAUUGCACUUGUCCCGGCCUGU - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196