miRBase entry: pbv-mir-124a-3

Stem-loop pbv-mir-124a-3


Accession
MI0030214
Description
Python bivittatus pbv-mir-124a-3 precursor miRNA


Sequence

cuuggcuuaagcccuuCGUGUUCACAGCGGACCUUGAUuuaauuucgauacaauUAAGGCACGCGGUGAAUGCCAAgagagaagccacguc
..((((((.....(((.((((((((.(((..((((((((............))))))))..))).)))))))).)))....))))))....

Structure
--cu      aagcc   C        A   GA        uaauu 
    uggcuu     cuu GUGUUCAC GCG  CCUUGAUu     u
    ||||||     ||| |||||||| |||  ||||||||      
    accgaa     gAA CGUAAGUG CGC  GGAAUuaa     c
cugc      -gaga   C        G   AC        cauag 


Annotation confidence Not enough data
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Genome context
KE955369.1: 120817-120907 [+]

Database links

Mature pbv-miR-124a-5p

Accession MIMAT0038913
Description Python bivittatus pbv-miR-124a-5p mature miRNA
Sequence 17 - CGUGUUCACAGCGGACCUUGAU - 38
Evidence experimental
Illumina [1]

Mature pbv-miR-124a-3p

Accession MIMAT0038914
Description Python bivittatus pbv-miR-124a-3p mature miRNA
Sequence 55 - UAAGGCACGCGGUGAAUGCCAA - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196