miRBase entry: pbv-mir-126

Stem-loop pbv-mir-126


Accession
MI0030218
Description
Python bivittatus pbv-mir-126 precursor miRNA


Sequence

gcggcuCAUUAUUACUUUUGGUACGCGcugugccacuucaaacUCGUACCGUGAGUAAUAAUGCGcggagggccagc
.(.((.(((((((((((.(((((((.(.((........))..).))))))).))))))))))).)).).........

Structure
--------g g  u           U       C -c  ugc 
         c gc CAUUAUUACUU UGGUACG G  ug   c
         | || ||||||||||| ||||||| |  ||    
         g cG GUAAUAAUGAG GCCAUGC c  ac   a
cgaccggga g  C           U       U aa  uuc 


Annotation confidence Not enough data
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Genome context
KE954781.1: 124370-124446 [+]

Database links

Mature pbv-miR-126-5p

Accession MIMAT0038918
Description Python bivittatus pbv-miR-126-5p mature miRNA
Sequence 7 - CAUUAUUACUUUUGGUACGCG - 27
Evidence experimental
Illumina [1]

Mature pbv-miR-126-3p

Accession MIMAT0038919
Description Python bivittatus pbv-miR-126-3p mature miRNA
Sequence 44 - UCGUACCGUGAGUAAUAAUGCG - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196