miRBase entry: pbv-mir-128-1

Stem-loop pbv-mir-128-1


Accession
MI0030219
Description
Python bivittatus pbv-mir-128-1 precursor miRNA


Sequence

ucaugagcuguuggauuCGGGGCCGUAACACUGUCUGAGAggguuacauuucUCACAGUGAACCGGUCUCUUUuucagcugcuuucuggcuu
.((.((((.((((((...(((((((...((((((..((((((......))))))))))))...)))))))...)))))).))))..))....

Structure
---u  -u    u      uuC       UAA      CU      gu 
    ca  gagc guugga   GGGGCCG   CACUGU  GAGAgg  u
    ||  |||| ||||||   |||||||   ||||||  ||||||   
    gu  uucg cgacuu   CUCUGGC   GUGACA  CUcuuu  a
uucg  cu    u      UUU       CAA      --      ac 


Annotation confidence Not enough data
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Genome context
KE956497.1: 35240-35331 [+]

Database links

Mature pbv-miR-128-5p

Accession MIMAT0038920
Description Python bivittatus pbv-miR-128-5p mature miRNA
Sequence 18 - CGGGGCCGUAACACUGUCUGAGA - 40
Evidence experimental
Illumina [1]

Mature pbv-miR-128-3p

Accession MIMAT0038921
Description Python bivittatus pbv-miR-128-3p mature miRNA
Sequence 53 - UCACAGUGAACCGGUCUCUUU - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196