miRBase entry: pbv-mir-129b

Stem-loop pbv-mir-129b


Accession
MI0030222
Description
Python bivittatus pbv-mir-129b precursor miRNA


Sequence

gucuucucuggguCUUUUUGCGGUCUGGGCUUUCugggucuguccaaccccguaucagaAAGCCCUUACCCCAAAAAGCAUccgggguuguacga
(((..(((((((((((((((.(((..(((((((((((((.......))))......)))))))))..))).))))))).))))))))..).))..

Structure
--  - uu        -       C   CU         ------    cu 
  gu c  cucugggu CUUUUUG GGU  GGGCUUUCu      gggu  g
  || |  |||||||| ||||||| |||  |||||||||      ||||  u
  ca g  ggggccUA GAAAAAC CCA  CCCGAAaga      ccca  c
ag  u uu        C       C   UU         cuaugc    ac 


Annotation confidence Not enough data
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Genome context
KE953229.1: 75173-75267 [-]

Database links

Mature pbv-miR-129b-5p

Accession MIMAT0038924
Description Python bivittatus pbv-miR-129b-5p mature miRNA
Sequence 14 - CUUUUUGCGGUCUGGGCUUUC - 34
Evidence experimental
Illumina [1]

Mature pbv-miR-129b-3p

Accession MIMAT0038925
Description Python bivittatus pbv-miR-129b-3p mature miRNA
Sequence 60 - AAGCCCUUACCCCAAAAAGCAU - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196