miRBase entry: pbv-mir-135-1

Stem-loop pbv-mir-135-1


Accession
MI0030232
Description
Python bivittatus pbv-mir-135-1 precursor miRNA


Sequence

uaucccauugucuucUAUGGCUUUUUAUUCCUAUGUGAuuauauugcuaauuucAUAUAGGGAUUGAAGCCAUGCAAuacacugggga
...((((.(((.((.(((((((((..((((((((((((..............)))))))))))).))))))))).)).))).))))..

Structure
uau    u   c  c         UU            uuauau 
   ccca ugu uu UAUGGCUUU  AUUCCUAUGUGA      u
   |||| ||| || |||||||||  ||||||||||||       
   gggu aca AA GUACCGAAG  UAGGGAUAUAcu      g
-ag    c   u  C         -U            uuaauc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KE958355.1: 30921-31008 [-]

Database links

Mature pbv-miR-135-5p

Accession MIMAT0038941
Description Python bivittatus pbv-miR-135-5p mature miRNA
Sequence 16 - UAUGGCUUUUUAUUCCUAUGUGA - 38
Evidence experimental
Illumina [1]

Mature pbv-miR-135-3p

Accession MIMAT0038942
Description Python bivittatus pbv-miR-135-3p mature miRNA
Sequence 55 - AUAUAGGGAUUGAAGCCAUGCAA - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196