miRBase entry: pbv-mir-137a

Stem-loop pbv-mir-137a


Accession
MI0030235
Description
Python bivittatus pbv-mir-137a precursor miRNA


Sequence

agcuuuccgacucucuucggugACGGGUAUUCUUGGGUGGAUAAUAcggauuacguugUUAUUGCUUAAGAAUACGCGUAGucgaggagaguacucgcggc
.(((.....(((((((((((..(((.(((((((((((((.((((((((.....)).))))))))))))))))))).)))..)))))))))))......)))

Structure
a   -uuccg           ug   G             G      -  g 
 gcu      acucucuucgg  ACG GUAUUCUUGGGUG AUAAUA cg a
 |||      |||||||||||  ||| ||||||||||||| |||||| || u
 cgg      ugagaggagcu  UGC CAUAAGAAUUCGU UAUUgu gc u
-   cgcuca           GA   G             -      u  a 


Annotation confidence Not enough data
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Genome context
KE953332.1: 63213-63313 [+]

Database links

Mature pbv-miR-137a-5p

Accession MIMAT0038945
Description Python bivittatus pbv-miR-137a-5p mature miRNA
Sequence 23 - ACGGGUAUUCUUGGGUGGAUAAUA - 46
Evidence experimental
Illumina [1]

Mature pbv-miR-137a-3p

Accession MIMAT0038946
Description Python bivittatus pbv-miR-137a-3p mature miRNA
Sequence 59 - UUAUUGCUUAAGAAUACGCGUAG - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196