miRBase entry: pbv-mir-142

Stem-loop pbv-mir-142


Accession
MI0030240
Description
Python bivittatus pbv-mir-142 precursor miRNA


Sequence

gacaguggacucaUCCAUAAAGUAGAAAGCACUAcuaaacgcuuguguccaagugUAGUGUUUCCUACUUUAUGGAugaguguacugug
.((((((.(((((((((((((((((.(((((((((.....(((((....)))))))))))))).))))))))))))))))).)))))).

Structure
g      g                 A         uaaac     u 
 acagug acucaUCCAUAAAGUAG AAGCACUAc     gcuug g
 |||||| ||||||||||||||||| |||||||||     |||||  
 ugucau ugaguAGGUAUUUCAUC UUUGUGAUg     ugaac u
g      g                 C         -----     c 


Annotation confidence Not enough data
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Genome context
KE953330.1: 386968-387056 [-]

Database links

Mature pbv-miR-142-5p

Accession MIMAT0038953
Description Python bivittatus pbv-miR-142-5p mature miRNA
Sequence 14 - UCCAUAAAGUAGAAAGCACUA - 34
Evidence experimental
Illumina [1]

Mature pbv-miR-142-3p

Accession MIMAT0038954
Description Python bivittatus pbv-miR-142-3p mature miRNA
Sequence 56 - UAGUGUUUCCUACUUUAUGGA - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196