Stem-loop pbv-mir-155b

Accession

MI0030253

Description

Python bivittatus pbv-mir-155b precursor miRNA

Sequence

ccagacagugUUAAUGCUACUCAUGUUGGGAGUuugaaauaacacucacuccucuuccaguagcauuuacucuuacuga
.(((..((.((.(((((((((......((((((..(........)..)))))).....))))))))).)).))..))).

Structure

c   ac  u  U         CAUGUU      uu aaa 
 cag  ag gU AAUGCUACU      GGGAGU  g   u
 |||  || || |||||||||      ||||||  |    
 guc  uc ca uuacgauga      uccuca  c   a
a   au  u  u         -ccuuc      cu aca 

Annotation confidence Not enough data

Genome context

KE957289.1: 51082-51160 [-]

Mature pbv-miR-155b-5p

• Accession: MIMAT0038974
• Description: Python bivittatus pbv-miR-155b-5p mature miRNA
• Sequence: 11 - UUAAUGCUACUCAUGUUGGGAGU - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196