miRBase entry: pbv-mir-181c

Stem-loop pbv-mir-181c


Accession
MI0030258
Description
Python bivittatus pbv-mir-181c precursor miRNA


Sequence

gucacaaucAACAUUCAUUCUGUCGGUGGGUuguuaugcuggaggagaagcucacugaucagugaaugcaacuguggc
((((((.....((((((((..(((((((((((................))))))))))).))))))))....))))))

Structure
      aucAA        CU           guuaugc 
gucaca     CAUUCAUU  GUCGGUGGGUu       u
||||||     ||||||||  |||||||||||        
cggugu     guaaguga  uagucacucga       g
      -caac        -c           agaggag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KE953590.1: 289002-289079 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from pbv-mir-181c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pbv-miR-181c-5p

Accession MIMAT0038979
Description Python bivittatus pbv-miR-181c-5p mature miRNA
Sequence 10 - AACAUUCAUUCUGUCGGUGGGU - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196