miRBase entry: pbv-mir-196a

Stem-loop pbv-mir-196a


Accession
MI0030269
Description
Python bivittatus pbv-mir-196a precursor miRNA


Sequence

ucugugaauUAGGUAGUUUCACGUUGUUGGGAauucauuuuuaauacACAAGAACAUAAAACUACCUGAuuuacucc
...((((((((((((((((...(((.(((...................))).)))...))))))))))))))))...

Structure
ucu                CAC   G   GGAauuca 
   gugaauUAGGUAGUUU   GUU UUG        u
   ||||||||||||||||   ||| |||        u
   cauuuAGUCCAUCAAA   CAA AAC        u
ccu                AUA   G   Acauaauu 


Annotation confidence Not enough data
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Genome context
KE954034.1: 30616-30692 [-]

Database links

Mature pbv-miR-196a-5p

Accession MIMAT0038993
Description Python bivittatus pbv-miR-196a-5p mature miRNA
Sequence 10 - UAGGUAGUUUCACGUUGUUGGGA - 32
Evidence experimental
Illumina [1]

Mature pbv-miR-196a-3p

Accession MIMAT0038994
Description Python bivittatus pbv-miR-196a-3p mature miRNA
Sequence 48 - ACAAGAACAUAAAACUACCUGA - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196