miRBase entry: pbv-mir-199-1

Stem-loop pbv-mir-199-1


Accession
MI0030271
Description
Python bivittatus pbv-mir-199-1 precursor miRNA


Sequence

CCCAGUGUUCAGACUACCUGUUCAggaaacuacaaagguguACAGUAGUCUGCACAUUGGUUagauuggguuugga
.(((((((.((((((((.(((.((..............)).))))))))))).)))))))................

Structure
---------------C       U        C   U  ggaaac 
                CCAGUGU CAGACUAC UGU CA      u
                ||||||| |||||||| ||| ||       
                GGUUACA GUCUGAUG ACA gu      a
agguuuggguuagaUU       C        -   u  ggaaac 


Annotation confidence Not enough data
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Genome context
KE954297.1: 75307-75382 [-]

Database links

Mature pbv-miR-199-5p

Accession MIMAT0038996
Description Python bivittatus pbv-miR-199-5p mature miRNA
Sequence 1 - CCCAGUGUUCAGACUACCUGUUCA - 24
Evidence experimental
Illumina [1]

Mature pbv-miR-199-3p

Accession MIMAT0038997
Description Python bivittatus pbv-miR-199-3p mature miRNA
Sequence 42 - ACAGUAGUCUGCACAUUGGUU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196