miRBase entry: pbv-mir-204-2

Stem-loop pbv-mir-204-2


Accession
MI0030279
Description
Python bivittatus pbv-mir-204-2 precursor miRNA


Sequence

gaccacaugaccugugggcUUCCCUUUGUCAUCCUAUGCCUGgagcucacagugaggcagggccagcaaaggguugcucagcuguugucuc
(((.(((.(.(...(((((..((((((((...(((.(((((...(((...))).))))))))...))))))))..)))))))))).)))..

Structure
--   c   u a cug     UU        CAU   A     Gga   c 
  gac aca g c   ugggc  CCCUUUGU   CCU UGCCU   gcu  
  ||| ||| | |   |||||  ||||||||   ||| |||||   ||| a
  cug ugu c g   acucg  gggaaacg   ggg acgga   uga  
cu   u   - - ---     uu        acc   -     --g   c 


Annotation confidence Not enough data
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Genome context
KE960308.1: 31432-31522 [-]

Database links

Mature pbv-miR-204-5p

Accession MIMAT0039006
Description Python bivittatus pbv-miR-204-5p mature miRNA
Sequence 20 - UUCCCUUUGUCAUCCUAUGCCUG - 42
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196