miRBase entry: pbv-mir-210

Stem-loop pbv-mir-210


Accession
MI0030285
Description
Python bivittatus pbv-mir-210 precursor miRNA


Sequence

ccagaagcaggugAGCCACUGACUAACGCACAUUGugcugcuaauguccccaCUGUGCGUGUGACAGCGGCUAAccugcuucuaggaca
((((((((((((.((((.(((.(..(((((((.((.(..((....))..))).)))))))..).))).)))).)))))))))).))...

Structure
---  -          g    A   A UA       U  u cu  u 
   cc agaagcaggu AGCC CUG C  ACGCACA UG g  gc a
   || |||||||||| |||| ||| |  ||||||| || |  ||  
   gg ucuucguccA UCGG GAC G  UGCGUGU ac c  ug a
aca  a          A    C   A UG       C  - cc  u 


Annotation confidence Not enough data
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Genome context
KE953820.1: 86197-86285 [+]

Database links

Mature pbv-miR-210-5p

Accession MIMAT0039014
Description Python bivittatus pbv-miR-210-5p mature miRNA
Sequence 14 - AGCCACUGACUAACGCACAUUG - 35
Evidence experimental
Illumina [1]

Mature pbv-miR-210-3p

Accession MIMAT0039015
Description Python bivittatus pbv-miR-210-3p mature miRNA
Sequence 53 - CUGUGCGUGUGACAGCGGCUAA - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196