miRBase entry: pbv-mir-217

Stem-loop pbv-mir-217

Accession

MI0030291

Description

Python bivittatus pbv-mir-217 precursor miRNA

Sequence

uuuugaugucgcagaUACUGCAUCAGGAACUGAUUggauaauaaucaggcaccaucaguucuuaaugcauugccuucagcaucuaaa
....(((((.(.((.((.(((((.((((((((((.((..............)))))))))))).))))).)).)).).)))))....

Structure

uuuu     c c  a  C     C          U  auaaua 
    gaugu g ag UA UGCAU AGGAACUGAU gg      a
    ||||| | || || ||||| |||||||||| ||       
    cuacg c uc gu acgua uucuugacua cc      u
aaau     a u  c  u     a          -  acggac

Annotation confidence Not enough data

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Genome context

KE953947.1: 202057-202143 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pbv-mir-217

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature pbv-miR-217-5p

Accession	MIMAT0039026
Description	Python bivittatus pbv-miR-217-5p mature miRNA
Sequence	16 - UACUGCAUCAGGAACUGAUU - 35
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196