miRBase entry: pbv-mir-219-1

Stem-loop pbv-mir-219-1


Accession
MI0030294
Description
Python bivittatus pbv-mir-219-1 precursor miRNA


Sequence

ggagcccuggccugUGAUUGUCCAAACGCAAUUCUUGucucuccaccgagaguugagucuggacaucaugagccggggu
...((((((((.((((((.(((((.((.(((((((((.........))))))))).)).))))))))))).))))))))

Structure
gga        c      U     A  G         ucu 
   gcccuggc ugUGAU GUCCA AC CAAUUCUUG   c
   |||||||| |||||| ||||| || |||||||||   u
   uggggccg guacua caggu ug guugagagc   c
---        a      -     c  a         cac 


Annotation confidence Not enough data
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Genome context
KE960054.1: 25922-26000 [-]

Database links

Mature pbv-miR-219-5p

Accession MIMAT0039029
Description Python bivittatus pbv-miR-219-5p mature miRNA
Sequence 15 - UGAUUGUCCAAACGCAAUUCUUG - 37
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196