miRBase entry: pbv-mir-219-2

Stem-loop pbv-mir-219-2


Accession
MI0030295
Description
Python bivittatus pbv-mir-219-2 precursor miRNA


Sequence

gaaccuuugcuccUGAUUGUCCAAACGCAAUUCUUGugcagaaaaacaugccaaccaAGAAUUGUGUCUGGACAUCGGUggcuaagccuucga
(((.(((.(((.(((((.(((((.((((((((((((.(((........)))....)))))))))))).)))))))))).))).)))..)))..

Structure
--   -c   u   c     U     A            ---u   gaa 
  gaa  cuu gcu cUGAU GUCCA ACGCAAUUCUUG    gca   a
  |||  ||| ||| ||||| ||||| ||||||||||||    |||    
  cuu  gaa cgg GGCUA CAGGU UGUGUUAAGAac    cgu   a
ag   cc   u   U     -     C            caac   aca 


Annotation confidence Not enough data
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Genome context
KE955379.1: 23995-24087 [+]

Database links

Mature pbv-miR-219-5p

Accession MIMAT0039029
Description Python bivittatus pbv-miR-219-5p mature miRNA
Sequence 14 - UGAUUGUCCAAACGCAAUUCUUG - 36
Evidence experimental
Illumina [1]

Mature pbv-miR-219-3p

Accession MIMAT0039030
Description Python bivittatus pbv-miR-219-3p mature miRNA
Sequence 58 - AGAAUUGUGUCUGGACAUCGGU - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196