miRBase entry: pbv-mir-429

Stem-loop pbv-mir-429


Accession
MI0030309
Description
Python bivittatus pbv-mir-429 precursor miRNA


Sequence

gcgccugccgaucgcugucuuaccagacaaauuuagaucuuaaucuauuccugucUAAUACUGUCUGGUAAUGCCGUcgauucgcauuggcaa
..((((((.((((((.((.((((((((((...((((((..............))))))...)))))))))).)).).))))).)))..)))..

Structure
gc   --   c     - u  c          aau      cuuaau 
  gcc  ugc gaucg c gu uuaccagaca   uuagau      c
  |||  ||| ||||| | || ||||||||||   ||||||       
  cgg  acg uuagc G CG AAUGGUCUGU   AAUcug      u
aa   uu   c     U C  U          CAU      uccuua 


Annotation confidence Not enough data
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Genome context
KE953648.1: 224184-224276 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from pbv-mir-429
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pbv-miR-429-3p

Accession MIMAT0039050
Description Python bivittatus pbv-miR-429-3p mature miRNA
Sequence 56 - UAAUACUGUCUGGUAAUGCCGU - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196