Stem-loop rno-mir-3084a-1

Accession

MI0030358

Description

Rattus norvegicus rno-mir-3084a-1 precursor miRNA

Gene family

MIPF0001536; mir-3084

Literature search

1 open access papers mention rno-mir-3084a-1
(6 sentences)

Sequence

3181 reads, 46 reads per million, 336 experiments

aauagUUGAAGGUUCAUUAGCAGAGUAacugcauacaguaaUUCUGCCAGUCCCCUUCAGACAaaaa
.....(((((((...(((.(((((((.((((....)))).))))))).)))..))))))).......

Structure

--aauag       UUC   A       A    c 
       UUGAAGG   AUU GCAGAGU acug a
       |||||||   ||| ||||||| ||||  
       GACUUCC   UGA CGUCUUa ugac u
aaaaACA       -CC   C       a    a 

Annotation confidence High

Genome context

chr19: 43403103-43403169 [+]

Mature rno-miR-3084a-1-5p

• Accession: MIMAT0035739
• Description: Rattus norvegicus rno-miR-3084a-1-5p mature miRNA
• Sequence: 6 - UUGAAGGUUCAUUAGCAGAGUA - 27
• Evidence: experimental ; RNAseq-metaanalysis [1]

Mature rno-miR-3084a-3p

• Accession: MIMAT0035740
• Description: Rattus norvegicus rno-miR-3084a-3p mature miRNA
• Sequence: 42 - UUCUGCCAGUCCCCUUCAGACA - 63
• Evidence: experimental ; RNAseq-metaanalysis [1]

References

1. PubMed ID: 23329697
   Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters
   "Uva P, Da Sacco L, Del Corno M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A"
   "RNA (2013) 19:365-379