miRBase entry: tae-MIR9657a

Stem-loop tae-MIR9657a


Accession
MI0030375
Description
Triticum aestivum tae-MIR9657a precursor miRNA
Gene family
MIPF0001955; MIR9657

Literature search
1 open access papers mention tae-MIR9657a
(2 sentences)

Sequence

32963 reads, 213 reads per million, 116 experiments
gcgugccggcuccguucgccggagaagcuuacugcggaccaacgccgUGUGCUUCCUCGUCGAACGGUggcgaccacg
.((((.((.(.(((((((.(((.(((((.(((.(((......))).))).))))).))).))))))).).))..))))

Structure
g    -c  g u       c   a     u   u   ga 
 cgug  cg c ccguucg cgg gaagc uac gcg  c
 ||||  || | ||||||| ||| ||||| ||| |||   
 gcac  gc g GGCAAGC GCU CUUCG GUg cgc  c
-    ca  g U       U   C     U   c   aa 


Annotation confidence Not enough data
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Genome context
3B: 720238412-720238489 [-]

Database links

Mature tae-miR9657a-3p

Accession MIMAT0035765
Description Triticum aestivum tae-miR9657a-3p mature miRNA
Sequence 48 - UGUGCUUCCUCGUCGAACGGU - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24734873
    Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
    Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
    BMC Genomics (2014) 15:289