miRBase entry: tae-MIR9662a

Stem-loop tae-MIR9662a


Accession
MI0030382
Description
Triticum aestivum tae-MIR9662a precursor miRNA
Gene family
MIPF0002119; MIR9662

Literature search
2 open access papers mention tae-MIR9662a
(2 sentences)

Sequence

3549124 reads, 18163 reads per million, 116 experiments
ggggagcccggcggcucucugguguucaagcaggaaccucaugcuaccggcagcaugcggcgcuugcUUGAACAUCCCAGAGCCACCGgcgugccaa
((.(.(((.((.((((((..((((((((((((((..((.((((((......)))))).))..))))))))))))))..)))))).))))).).))..

Structure
--  g a   c  c      cu              aa  u      ac 
  gg g gcc gg ggcucu  gguguucaagcagg  cc caugcu  c
  || | ||| || ||||||  ||||||||||||||  || ||||||   
  cc u cgG CC CCGAGA  CUACAAGUUcguuc  gg guacga  g
aa  g g   -  A      CC              gc  c      cg 


Annotation confidence Not enough data
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Genome context
6A: 54567486-54567582 [+]

Database links

Mature tae-miR9662a-3p

Accession MIMAT0035772
Description Triticum aestivum tae-miR9662a-3p mature miRNA
Sequence 68 - UUGAACAUCCCAGAGCCACCG - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24734873
    Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
    Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
    BMC Genomics (2014) 15:289